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usegalaxy-no / galaxyadmin

A repository for managing the work of the usegalaxy.no GalaxyAdmin team
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Tool: yhoogstrate/ega_download_streamer, missing java dependency #1

Closed torfinnnome closed 3 years ago

torfinnnome commented 3 years ago

https://usegalaxy.no/reports/jobs/job_info?f-state=Unfinished&f-specified_date=All&sort=id&operation=job_info&id=232693d367226fa0&webapp=reports&sort_id=default&order=default

sysadmin@slurm /srv/galaxy/jobs/004/4563 $ cat outputs/tool_stderr
/srv/galaxy/jobs/004/4563/tool_script.sh: 9: /srv/galaxy/jobs/004/4563/tool_script.sh: java: not found
/srv/galaxy/jobs/004/4563/tool_script.sh: 9: /srv/galaxy/jobs/004/4563/tool_script.sh: java: not found
Error: making the request failed

This should be fixed upstream.

torfinnnome commented 3 years ago

Better to use "EGA Download Client" tool, by iuc. Removing this tool.