Closed ehj000 closed 3 years ago
This is clearly a dependency issue. We had similar problems with this tool in October, but Torfinn managed to fix them.
@ehj000 Can you share a failing history with me? torfn@nmbu.no on usegalaxy.no.
I have shared it earlier: https://usegalaxy.no/u/bf52c02868d747c5b784466753839ed6/h/rt15023 Copying the files to test now and will share that history as well when done
I am not able to evaluate the results, but the workflow is completing now. Thanks
The most recent version of miRNA differential expression (miRBase, hg38) is failing with the following error: Traceback (most recent call last): File "_evaluateexpression.py", line 1, in
from galaxy_ext.expressions.handle_job import run; run()
File "/srv/galaxy/server/lib/galaxy_ext/expressions/handle_job.py", line 21, in
from galaxy.tools.expressions import evaluate
File "/srv/galaxy/server/lib/galaxy/tools/init.py", line 60, in
from galaxy.tools.cache import ToolDocumentCache
File "/srv/galaxy/server/lib/galaxy/tools/cache.py", line 15, in
from sqlitedict import SqliteDict
ModuleNotFoundError: No module named 'sqlitedict'