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uw-ipd / RoseTTAFold2

MIT License
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psutil version issue #6

Closed scg34 closed 1 year ago

scg34 commented 1 year ago

I had an issue when performing the first (example) prediction after installing as follows:

ImportError: version conflict: '/usr/local/xtal/miniconda/envs/RF2/lib/python3.10/site-packages/psutil/_psutil_linux.cpython-310-x86_64-linux-gnu.so' C extension module was built for another version of psutil (5.9.0 instead of 5.9.5); you may try to 'pip uninstall psutil', manually remove /usr/local/xtal/miniconda/envs/RF2/lib/python3.10/site-packages/psutil/_psutil_linux.cpython-310-x86_64-linux-gnu.so or clean the virtual env somehow, then reinstall

Basically an incorrect psutil version installed by pip. Easy to fix, just removed the offending package and then reinstalled using the appropriate version:

conda activate RF2
pip uninstall psutil
pip install --ignore-installed --no-cache-dir psutil==5.9.0

Posting in case anyone else gets tripped up with the same issue. Might be worth adding: psutil==5.9.0 to SE3Transformer/requirements.txt?

Cheers,

Stephen