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uw-ipd / RoseTTAFold2NA

RoseTTAFold2 protein/nucleic acid complex prediction
MIT License
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RNA connected to end of protein #16

Open jchap136 opened 1 year ago

jchap136 commented 1 year ago

I ran this program successfully, but the output PDB file does not look right. The last amino acid of the protein is connected to the first RNA base. Is there a way to fix this?

fdimaio commented 1 year ago

Can you share your inputs?

jchap136 commented 1 year ago

I've attached TXT files since github does not allow attaching .fa files:

RNA.txt upf1.txt

jwbaebio commented 1 year ago

Having the same problem, using the example files. FYI: Mine ran on Miniconda (Conda 4.12.0 Python 3.9.7), CPU only.