How to choose GPU for execution?

[Phage-structure-geek]

Hi,

How do I tell RF2NA which GPU to use? The system assigns number 0 to my second GPU while the more powerful GPU is number 1. The more powerful GPU is the closest to the CPU, so moving them around is futile.

So, how do I tell run_RF2NA.sh to use GPU 1, but not GPU 0?

Thanks,

Petr

[Phage-structure-geek]

Replying to my own question...

This works for running on CUDA device 1 instead of the default device 0:

CUDA_VISIBLE_DEVICES=1 runRF2NA.sh output P:protein1.fasta P:protein2.fasta P:protein3.fasta