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uw-ipd / RoseTTAFold2NA

RoseTTAFold2 protein/nucleic acid complex prediction
MIT License
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Protein/RNA prediction taking too long #78

Open tanmoyp635 opened 6 months ago

tanmoyp635 commented 6 months ago

I have successfully installed Rosettafold2NA on my workstation. My workstation has 12 CPUs and also has GPU support. The code is running with CUDA. However, the protein-RNA prediction has been running for the last 48 hours without generating any output. The only lines written in log/make_msa.rna_binding_protein.stdout file are :

out_prefix /job2/tpaul/RoseTTAFold2NA/example/rna_pred/rna_binding_protein Running HHblits against UniRef30 with E-value cutoff 1e-10

Can you suggest me something? If you need any system information, please feel free to reach out.

omarwagih commented 2 months ago

@tanmoyp635 did you ever get a resolution to this?