Create manifest of microarray data

va-big-data-genomics / trellis-mvp-data-modelling

Resources uses for interacting and updating the Trellis MVP graph database model.

MIT License

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Create manifest of microarray data #4

Closed pbilling closed 1 year ago

pbilling commented 1 year ago

The Boston team would like to analyze microarray data delivered from Personalis and has requested a manifest of data objects.

pbilling commented 1 year ago

Cypher query:

MATCH (n:PersonalisSequencing)
MATCH (n)-[:GENERATED]->(m:Microarray)
RETURN n.ShippingId, m.uri

pbilling commented 1 year ago

Wasn't able to export a CSV with other ~120,000 records, so exported as JSON. Object added to Boston shared bucket: /microarray/20230410-microarray-manifest-n419978.json