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valenlab / amplican

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clusterCrit is no longer supported #14

Closed yinshiyi closed 1 year ago

yinshiyi commented 1 year ago

clusterCrit is no longer supported

BiocManager::install("clusterCrit")
'getOption("repos")' replaces Bioconductor standard repositories, see 'help("repositories", package = "BiocManager")'
for details.
Replacement repositories:
    CRAN: https://cran.rstudio.com/
Bioconductor version 3.16 (BiocManager 1.30.20), R 4.2.2 (2022-10-31)
Installing package(s) 'clusterCrit'
Warning message:
package ‘clusterCrit’ is not available for Bioconductor version '3.16'

A version of this package for your version of R might be available elsewhere,
see the ideas at
https://cran.r-project.org/doc/manuals/r-patched/R-admin.html#Installing-packages

Does anyone have a suggestion? Thank you

yinshiyi commented 1 year ago

For anyone who has trouble install this software after 2023

# conda install 
conda create -n amplican 
conda install -c bioconda bioconductor-amplican