Add tests using testthat - Githubissues

vallenderlab / MicrobiomeR

A comprehensive and customizable R package for microbiome analysis.

https://vallenderlab.github.io/MicrobiomeR/

MIT License

20 stars 4 forks source link

Add tests using testthat #49

Closed sdhutchins closed 5 years ago

sdhutchins commented 5 years ago

References

testthat docs

Hadley's breakdown

ToDo

[x] Add a test for ordination
[x] Add a test for heat tree creation
[x] Add a test for correlation plot creation
[x] Add tests for formatting functions
[x] Add tests for palettes
[x] Add tests for utils (#61)
[x] Add tests for phyloseq functions
[x] test for stacked_barplot
[x] test for alpha_diversity_plot
[x] test for permanova
[x] test for get_alpha_diversity_measures (1c3a7ae)

sdhutchins commented 5 years ago

Code coverage was at 74% in PR #67. This issue can be closed now.