T1w ax - multiple runs - Githubissues

valosekj / dcm-brno

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T1w ax - multiple runs #12

Open valosekj opened 2 months ago

valosekj commented 2 months ago

sub-2389B/ses-2389B has two runs: run-01 contains only 21 slices (also GM seg under derivatives has 21 slices); run-02 contains 42 slices but is blurry --> use run-01:

cd /md3/dcm-brno/sub-2389B/ses-2389B/anat
mkdir notused
mv *run* notused
cp notused/sub-2389B_ses-2389B_run-01_T1w.json sub-2389B_ses-2389B_T1w.json
cp notused/sub-2389B_ses-2389B_run-01_T1w.nii.gz sub-2389B_ses-2389B_T1w.nii.gz

--> adding this subject to exclude.yml