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vanOosterhoutLab / HybridCheck

HybridCheck, an R package for quickly scripting scans of sequence data for recombination regions.
http://vanOosterhoutLab.github.io/HybridCheck/
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NaN values in Z - scores Four Taxon Tets #31

Open barteksan11 opened 3 years ago

barteksan11 commented 3 years ago

I'm using for taxon test on set of 5 species represented by different number of sequences. I've specifed populations and popCombs accordingly to manual and I'm running the analysis with these comands:

MyAnalysis$prepareFourTaxonTests(taxa = popCombos) MyAnalysis$runFourTaxonTests(numberOfBlocks = 10L ) fttResults <- MyAnalysis$tabulateFourTaxonTests(selections = "ALL" , neat = T, global = T)

But in results I got only NaN values for: D_jSD, Fd_1DD4_jSD, Fd_D2D4_jSD, D_jZ, Fd_1DD4_jZ, Fd_D2D4_jZ. Am I doing somthing wrong?