Calculate proportion of Type I/II NPH cells.

vandermeerlab / HD-system-brainstem

Code for analyzing data from recordings in mouse brainstem head direction circuit.

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Calculate proportion of Type I/II NPH cells. #22

Open stottbot opened 1 month ago

stottbot commented 1 month ago

(1) Make a list of NPH recording papers and their percentages of type I/II units. (2) decide on our definition for type I/II (3) write code to identify these. Run on existing NPH sessions. (4) Run on all NPH sessions once ExpKeys are done. Get a final percentage amongst all units recorded, and amongst eye movement-sensitive units. *Note: this requires a general definition for eye-movement sensitive unit.

stottbot commented 1 month ago

For the left eye and a right hemisphere neuron, a nasal saccade would be ipsi. L hem
nasal - CONTRA
temporal - IPSI

R hem nasal - IPSI temporal - CONTRA