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vandermeerlab / HD-system-brainstem

Code for analyzing data from recordings in mouse brainstem head direction circuit.
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Look for cerebellum labeling in existing histology #28

Open stottbot opened 3 months ago

stottbot commented 3 months ago

See if any of my existing histology composite slides show cerebellum nucleus labeling and have good DTN injection. Especially looking for mice with injection site labeling circumscribed to DTN only. See this doc:

https://docs.google.com/spreadsheets/d/1uTmj6ZoaFSiQIvN6VCT_3C62nd6qpMceE-pqW_GbN04/edit?usp=sharing

stottbot commented 3 months ago

The examples where I did see labeling in Medial Cerebellum were cases in which there was some virus expression anterior to DTN in either dorsal raphe or LDTg. I didn't have many examples of good DTN labeling with whole brain histology of the cerebellum (b/c I wasn't really looking to image that area). But with upcoming mice, I will image that part of cerebellum as well (whether or not there are Med Cerebellar cells).