vanheeringen-lab / anansnake

Automate long-running ANANSE analyses with snakemake
Apache License 2.0
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Why does anansnake need to create a new env every time it runs? #8

Closed duocang closed 1 year ago

duocang commented 1 year ago

Thanks for the work.

I am running the example provided. But I have one question: Can't it create .snakemake folder?

I checked the folder, and there are conda envs inside. The Downloading and installing remote packages process can take more than 1 hour. And then it is most likely that it will throw an error, saying something like one R package is missing.

This has made me very blue because I do not which packages are going to be used.

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