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vanheeringen-lab / gimmemotifs

Suite of motif tools, including a motif prediction pipeline for ChIP-seq experiments. See full GimmeMotifs documentation for detailed installation instructions and usage examples.
https://gimmemotifs.readthedocs.io/en/master
MIT License
109 stars 33 forks source link

clustered motifs for invertebrates #282

Open perinom opened 1 year ago

perinom commented 1 year ago

Hi Simon,

great tool, I missed using it!

any chance you have a Drosophila/arthropods/insects/invertebrates version of the clustered vertebrate motifs like gimme.vertebrate.v5.0? Or a code template to generate it?

Thanks!

simonvh commented 1 year ago

I don't I'm afraid. I can't seem to locate the script used to create the database. I would suggest to try `JASPAR2022_insects.pfm.