Multiqc reports - Githubissues

vanheeringen-lab / seq2science

Automated and customizable preprocessing of Next-Generation Sequencing data, including full (sc)ATAC-seq, ChIP-seq, and (sc)RNA-seq workflows. Works equally easy with public as local data.

https://vanheeringen-lab.github.io/seq2science

MIT License

155 stars 27 forks source link

Multiqc reports #930

Closed Maarten-vd-Sande closed 1 year ago

Maarten-vd-Sande commented 1 year ago

What problem is the PR solving / What's new?

Add MultiQC reports to the docs.

Checklist

[x] I made a PR to develop (not master)
[ ] If applicable: I updated the docs
[ ] I updated the CHANGELOG
[x] These changes are covered by the tests

Maarten-vd-Sande commented 1 year ago

@siebrenf I am now running RNA-seq with default samples and config for a QC report. I think it's pretty basic. If you have a nicer samples/config feel free to let me know :)

siebrenf commented 1 year ago

yea, the default RNA-seq run is a bit too succinct. I'll generate something more representative!