vanvalenlab / deepcell-tf

Deep Learning Library for Single Cell Analysis
https://deepcell.readthedocs.io
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DEEPCELL_ACCESS_TOKEN #694

Open mzj0418 opened 1 year ago

mzj0418 commented 1 year ago

**ValueError: DEEPCELL_ACCESS_TOKEN not found. Please set your access token to the DEEPCELL_ACCESS_TOKEN environment variable. For example:

export DEEPCELL_ACCESS_TOKEN=<your-token>.

If you don't yet have a token, you can create one at https://users.deepcell.org **

To Reproduce Steps to reproduce the behavior:

  1. Run ' from deepcell.applications import Mesmer app = Mesmer() '

2.I tried to log in to the given website address (https://users.deepcell.org/login/) to get the token, but after registering and logging in it kept showing username and password mismatch, and forgetting the password and resetting it to send it to email never responded. See error "Your username and password didn't match. Please try again."

Expected behavior I want to run mesmer_segmentation successfully!

Screenshots image

rharkes commented 1 year ago

https://github.com/vanvalenlab/deepcell-tf/blob/master/docs/source/API-key.rst They seem to require an API-key to fetch data from https://users.deepcell.org/api/getData/ See here I don't like this, since I'm now also waiting for my account to be approved.

rossbar commented 1 year ago

Starting with deepcell v0.12.7, models and datasets are accessed via an authentication system in alignment with the license terms, particularly the provisions re: commercial use.

The mods for the authentication system will begin responding shortly - apologies for any delays as we figure out the new system.

Note that previously-published models such as Mesmer are still available in older versions, i.e. v0.12.6 and below.

mzj0418 commented 1 year ago

@rossbar Thanks for your reply, I tried using deepcell v0.12.2 and successfully obtained the previously-published model(Mesmer).

DorisxinDU commented 1 year ago

Starting with deepcell v0.12.7, models and datasets are accessed via an authentication system in alignment with the license terms, particularly the provisions re: commercial use.

The mods for the authentication system will begin responding shortly - apologies for any delays as we figure out the new system.

Note that previously-published models such as Mesmer are still available in older versions, i.e. v0.12.6 and below.

@rossbar hello, I am still struggling with using Mesmer model by the code from deepcell.applications import Mesmer app = Mesmer(), I have install the deepcell version to v0.12.6, but still got errors, and I cannot get token from the website, please can you let me know how did you do it step by step. Thansk very much for your help.

rossbar commented 1 year ago

@DorisxinDU Mesmer is still available in older releases without the need for an API key. If you are getting exceptions related to access tokens, that means you are in an environment with deepcell-tf > 0.12.7. Please double-check your environment setup!

liuyang2006 commented 10 months ago

Dear author,

I have applied the token for my account: yang.liu@jax.org one week before. But I haven't got your reply. Would you please help me to get my token? Thank you!

Best regards,

Yang

apsilesian commented 2 months ago

The problem is that I need help logging in. I wrote two emails asking for assistance. I requested a password reset, and nothing came off. No email to reset it. I have the same issue as mzj0418 How can I get this token? Can someone help? Thank you.

dhtc commented 2 months ago

Dear authors,

I have attempted to apply the token, but upon logging in, I consistently receive a "mismatch" error. I have tried using both my work email and my personal email. Occasionally, I encounter a "500 Internal Server Error." I also attempted to reset my password but did not receive the reset email. Are there any restrictions on the application process? Could someone please assist me?

Best regards, hao