The Multiplex consumer is a new job type that segments images based on 2 input channels, nuclear and cytoplasm. There are several files that are changed to add the new job:
prometheus-redis-exporter adds the job queue be exported to Prometheus.
The QUEUES environment variable has been updated in the autoscaler, redis-janitor, and frontend.
Custom Prometheus metrics have been added to the prometheus-operator.
This PR adds the new consumer along with its complementary zip-consumer,
The Multiplex consumer is a new job type that segments images based on 2 input channels, nuclear and cytoplasm. There are several files that are changed to add the new job:
prometheus-redis-exporteradds the job queue be exported to Prometheus.QUEUESenvironment variable has been updated in theautoscaler,redis-janitor, andfrontend.prometheus-operator.For more information on the details of the job, see
deepcell.applications.MultiplexSegmentation.This PR may serve as a future example of all the necessary changes required for adding new job types.