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vaquerizaslab / fanc

FAN-C: Framework for the ANalysis of C-like data
GNU General Public License v3.0
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fancplot layer: AttributeError: 'Bed' object has no attribute '_parameters' #185

Open jmsanper opened 7 months ago

jmsanper commented 7 months ago

Hi, I'm trying to plot some boundaries from bed files that used to work with fancplot -p layer, but I'm getting this error:

2024-04-01 16:05:55,420 INFO Using non-interactive backend Traceback (most recent call last): File "/Users/josemaria/miniconda3/bin/fancplot", line 261, in FancPlot() File "/Users/josemaria/miniconda3/bin/fancplot", line 113, in init plot, plot_args = plot_method(args) File "/Users/josemaria/miniconda3/lib/python3.10/site-packages/fanc/commands/fancplot_commands.py", line 132, in scores data_selection = array._parameters AttributeError: 'Bed' object has no attribute '_parameters'

Bed files used were generated with fanc boundaries, of course. Could you please help me with this issue? Thank you!

jmsanper commented 7 months ago

Hi again, I realized that the problem was that I was trying to plot insulation scores calling to a bed file with a single window size and '-p scores' only accepts the insulation object as input. Sorry!