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vaquerizaslab / fanc

FAN-C: Framework for the ANalysis of C-like data
GNU General Public License v3.0
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How to do plotting.TriangularMatrixPlot without ice balancing #194

Open WenfanKK opened 3 months ago

WenfanKK commented 3 months ago

Hello,

I am trying to use tool to visualize some data from Capture HiC, and I realized that the regular ice balancing or ice transform for HiC is not compatible with these data type. Is there a parameter I can use to avoid such normalization in plotting? I use TriangularMatrixPlot mostly.

Thanks,

Wenfan

WenfanKK commented 3 months ago

example script and plot I use: image