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vaquerizaslab / tadtool

TADtool is an interactive tool for the identification of meaningful parameters in TAD-calling algorithms for Hi-C data.
MIT License
43 stars 13 forks source link

Using .hic/.cool files #26

Open aminakur opened 3 years ago

aminakur commented 3 years ago

Is it possible to use .hic or .cool files as a matrix file?

caragraduate commented 1 year ago

Hi there, I am having the same question, and I wonder if you got this solved?

aminakur commented 1 year ago

No. I wonder how to convert .hic/.cool to the matrix + region file required by Tadtool.