varfish-org / hgvs-rs

A port of biocommons/hgvs to the Rust programming language
Apache License 2.0
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Support representing repeated sequences from varnomen #126

Open holtgrewe opened 1 year ago

holtgrewe commented 1 year ago

Is your feature request related to a problem? Please describe. We can parse and represent the most common small variants pretty well. However, repeated sequence is currently out of scope.

Describe the solution you'd like Add support parsing and representing of the varnome repeated sequences.

Projecting such variants could be made possible by translating them into sequence representation. This could become another issue, though.

Describe alternatives you've considered N/A

Additional context The code for the parser/representation is in the parser module documented here on docs.rs.

Adding support for parsing and representation would be simple enough: