varfish-org / hgvs-rs

A port of biocommons/hgvs to the Rust programming language
Apache License 2.0
11 stars 4 forks source link

fix: issue with transcripts missing stop codon #67

Closed holtgrewe closed 1 year ago

holtgrewe commented 1 year ago

This was the case for ENST00000420031.2 causing trouble with GRCh37:1:16899669:C:T (rs373211172).

codecov[bot] commented 1 year ago

Codecov Report

Patch coverage: 83.33% and project coverage change: -0.02 :warning:

Comparison is base (f58ff53) 88.31% compared to head (2b50140) 88.30%.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #67 +/- ## ========================================== - Coverage 88.31% 88.30% -0.02% ========================================== Files 19 19 Lines 7453 7463 +10 ========================================== + Hits 6582 6590 +8 - Misses 871 873 +2 ``` | [Impacted Files](https://codecov.io/gh/bihealth/hgvs-rs/pull/67?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=bihealth) | Coverage Δ | | |---|---|---| | [src/mapper/altseq.rs](https://codecov.io/gh/bihealth/hgvs-rs/pull/67?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=bihealth#diff-c3JjL21hcHBlci9hbHRzZXEucnM=) | `94.93% <83.33%> (-0.36%)` | :arrow_down: | Help us with your feedback. Take ten seconds to tell us [how you rate us](https://about.codecov.io/nps?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=bihealth). Have a feature suggestion? [Share it here.](https://app.codecov.io/gh/feedback/?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=bihealth)

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