Implement AssemblyMapper - Githubissues

varfish-org / hgvs-rs

A port of biocommons/hgvs to the Rust programming language

Apache License 2.0

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Implement AssemblyMapper #7

Closed holtgrewe closed 1 year ago

holtgrewe commented 1 year ago

The aim is not to be feature complete but to make this example run through:

https://hgvs.readthedocs.io/en/stable/examples/manuscript-example.html#project-transcript-variant-nm-182763-2-c-688-403c-t-to-grch37-primary-assembly-using-splign-alignments

tests

[x] test_hgvs_variantmapper_near_discrepancies.py
[x] test_hgvs_assemblymapper.py