varfish-org / hgvs-rs

A port of biocommons/hgvs to the Rust programming language
Apache License 2.0
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Crash on GRCh37:1:89449508:A:ATTTTTTTTTTTT #99

Closed holtgrewe closed 1 year ago

holtgrewe commented 1 year ago

Current main crashes:

2023-04-18T14:00:49.545332Z TRACE var = Var { chrom: "1", pos: 89449508, reference: "A", alternative: "ATTTTTTTTTTTT" } thread 'main' panicked at 'byte index 18446744073709551615 is out of bounds ofMVEADRPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFERGRHGPPPPPRSRGPPRGFGAGRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPVKRGPPPRSGGPSPKRSAPSGLVRSSSGMGGRAPLSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYSTKDSYSSRDYPSSRDTRDYAPPPRDYTYRDYGHSSSRDDYP[...]', /data/cephfs-1/home/users/holtgrem_c/.cargo/registry/src/github.com-1ecc6299db9ec823/hgvs-0.6.1/src/mapper/altseq.rs:987:25 note: run withRUST_BACKTRACE=1environment variable to display a backtrace