search

varfish-org / varfish-server-worker

Rust-based background worker for varfish-server
MIT License
2 stars 1 forks source link

fix: make reading from S3 work and bump mehari #452

Closed holtgrewe closed 2 months ago

holtgrewe commented 2 months ago
codecov[bot] commented 2 months ago

Codecov Report

Attention: Patch coverage is 45.00000% with 22 lines in your changes missing coverage. Please review.

Project coverage is 74%. Comparing base (9a36358) to head (f922ec6). Report is 16 commits behind head on main.

Files with missing lines Patch % Lines
src/seqvars/aggregate/mod.rs 0% 14 Missing :warning:
src/seqvars/query/mod.rs 0% 6 Missing :warning:
src/seqvars/ingest/mod.rs 88% 1 Missing :warning:
src/strucvars/aggregate/output.rs 75% 1 Missing :warning:
Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #452 +/- ## =================================== Coverage 74% 74% =================================== Files 42 42 Lines 7382 7359 -23 =================================== - Hits 5489 5475 -14 + Misses 1893 1884 -9 ``` | [Files with missing lines](https://app.codecov.io/gh/varfish-org/varfish-server-worker/pull/452?dropdown=coverage&src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=varfish-org) | Coverage Δ | | |---|---|---| | [src/seqvars/prefilter/mod.rs](https://app.codecov.io/gh/varfish-org/varfish-server-worker/pull/452?src=pr&el=tree&filepath=src%2Fseqvars%2Fprefilter%2Fmod.rs&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=varfish-org#diff-c3JjL3NlcXZhcnMvcHJlZmlsdGVyL21vZC5ycw==) | `85% <100%> (+<1%)` | :arrow_up: | | [src/strucvars/aggregate/cli.rs](https://app.codecov.io/gh/varfish-org/varfish-server-worker/pull/452?src=pr&el=tree&filepath=src%2Fstrucvars%2Faggregate%2Fcli.rs&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=varfish-org#diff-c3JjL3N0cnVjdmFycy9hZ2dyZWdhdGUvY2xpLnJz) | `92% <100%> (ø)` | | | [src/seqvars/ingest/mod.rs](https://app.codecov.io/gh/varfish-org/varfish-server-worker/pull/452?src=pr&el=tree&filepath=src%2Fseqvars%2Fingest%2Fmod.rs&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=varfish-org#diff-c3JjL3NlcXZhcnMvaW5nZXN0L21vZC5ycw==) | `88% <88%> (+<1%)` | :arrow_up: | | [src/strucvars/aggregate/output.rs](https://app.codecov.io/gh/varfish-org/varfish-server-worker/pull/452?src=pr&el=tree&filepath=src%2Fstrucvars%2Faggregate%2Foutput.rs&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=varfish-org#diff-c3JjL3N0cnVjdmFycy9hZ2dyZWdhdGUvb3V0cHV0LnJz) | `62% <75%> (+<1%)` | :arrow_up: | | [src/seqvars/query/mod.rs](https://app.codecov.io/gh/varfish-org/varfish-server-worker/pull/452?src=pr&el=tree&filepath=src%2Fseqvars%2Fquery%2Fmod.rs&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=varfish-org#diff-c3JjL3NlcXZhcnMvcXVlcnkvbW9kLnJz) | `15% <0%> (+<1%)` | :arrow_up: | | [src/seqvars/aggregate/mod.rs](https://app.codecov.io/gh/varfish-org/varfish-server-worker/pull/452?src=pr&el=tree&filepath=src%2Fseqvars%2Faggregate%2Fmod.rs&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=varfish-org#diff-c3JjL3NlcXZhcnMvYWdncmVnYXRlL21vZC5ycw==) | `39% <0%> (+<1%)` | :arrow_up: | ... and [2 files with indirect coverage changes](https://app.codecov.io/gh/varfish-org/varfish-server-worker/pull/452/indirect-changes?src=pr&el=tree-more&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=varfish-org)