log_likelihood vs log_likelihood_target

varun-shanker / structural-evolution

MIT License

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log_likelihood vs log_likelihood_target #3

Open fergusonscripps opened 2 weeks ago

fergusonscripps commented 2 weeks ago

Apologies if I missed this somewhere but what is the difference between these two probabilities?

varun-shanker commented 2 weeks ago

log_likelihood is sequence log likelihood over the entire protein complex, whereas log_likelihood_target is scored only over the coordinates of the target chain.