The one I mentioned by email... I think it may be due to the last edit you made to incorporate the --preTrim option? Thanks!
[mirimia@bc2 vast-tools]$ ./vast-tools align
Global symbol "$cmd" requires explicit package name at /home/blencowe/blencowe1/mirimia/vast-tools/bin/RunDBS_1.pl line 322.
Global symbol "$cmd" requires explicit package name at /home/blencowe/blencowe1/mirimia/vast-tools/bin/RunDBS_1.pl line 323.
Global symbol "$cmd" requires explicit package name at /home/blencowe/blencowe1/mirimia/vast-tools/bin/RunDBS_1.pl line 324.
Execution of /home/blencowe/blencowe1/mirimia/vast-tools/bin/RunDBS_1.pl aborted due to compilation errors.
Hi Tim,
The one I mentioned by email... I think it may be due to the last edit you made to incorporate the --preTrim option? Thanks!
[mirimia@bc2 vast-tools]$ ./vast-tools align Global symbol "$cmd" requires explicit package name at /home/blencowe/blencowe1/mirimia/vast-tools/bin/RunDBS_1.pl line 322. Global symbol "$cmd" requires explicit package name at /home/blencowe/blencowe1/mirimia/vast-tools/bin/RunDBS_1.pl line 323. Global symbol "$cmd" requires explicit package name at /home/blencowe/blencowe1/mirimia/vast-tools/bin/RunDBS_1.pl line 324. Execution of /home/blencowe/blencowe1/mirimia/vast-tools/bin/RunDBS_1.pl aborted due to compilation errors.