search

vastgroup / vast-tools

A toolset for profiling alternative splicing events in RNA-Seq data.
MIT License
78 stars 29 forks source link

plot: "subscript out of bounds" #25

Closed funnell closed 10 years ago

funnell commented 10 years ago

Hello,

I get this error when running vast-tools plot:

$ vast-tools plot SA464_A14559_D0R1PACXX_8_1_VS_SA465_A14560_D0R1PACXX_8_1_INCLUSION-FILTERED.tab
Trying to load required package: optparse
PSI Plotter

// Input file: SA464_A14559_D0R1PACXX_8_1_VS_SA465_A14560_D0R1PACXX_8_1_INCLUSION-FILTERED.tab
// Tissue Group file: Did not provide
// Formatting input data for plotting...
// 7 out of 7 samples detected
// Plotting...
Error in `[<-`(`*tmp*`, , which(is.na(reordered$data[i, ])), value = NA) :
  subscript out of bounds
Execution halted
kcha commented 10 years ago

Hi Tyler,

Do you mind sending me your input file so that I can test it out? You can e-mail it to k.ha@mail.utoronto.ca.

Thanks, Kevin