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vastgroup / vast-tools

A toolset for profiling alternative splicing events in RNA-Seq data.
MIT License
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Integrate psiplot R package to "vast-tools plot" #34

Closed kcha closed 9 years ago

kcha commented 9 years ago

I'd like to update the code in psiplotter.R (aka vast-tools plot) to make use of the newer psiplot R package. The latter has been under development in parallel, and provides identical functionality to psiplotter.R. This change eliminates the need to maintain two separate but identical plot functions.

The impact on vast-tools is mostly behind the scenes. However, there will be an additional prerequisite to install psiplot (which will also be added to install.R). I have been testing these new changes in the branch use_psiplot.

Any thoughts on this? Or is it OK to proceed?

kcha commented 9 years ago

This update will be applied to version 0.2.0.