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vastgroup
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vast-tools
A toolset for profiling alternative splicing events in RNA-Seq data.
MIT License
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Fixed [issue #77]: diff now outputs to file instead of STDOUT; new op…
#78
Closed
UBrau
closed
5 years ago
UBrau
commented
5 years ago
This is a major overhaul for
diff
:
Greater than 10x performance boost. E.g., an mm9 comparison with two samples each now runs in 30 min on 2 cores.
Output table written to file rather than to STDOUT, in agreement with other modules
PDF output is optional
Default nLines lowered to 5000 with almost no performance hit but decreased memory
Adaptations to README to reflect these changes
This is a major overhaul for diff: