alternative splicing in one group

vastgroup / vast-tools

A toolset for profiling alternative splicing events in RNA-Seq data.

MIT License

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alternative splicing in one group #81

Closed CLeib closed 5 years ago

CLeib commented 5 years ago

Hello, Is there a way to get LeafCutter to work on a single set of data, instead of comparing two groups (so as to see the alternative splicing events within a sample/repeats)?

Thanks in advance

mirimia commented 5 years ago

Well, it's great you ask here, since that's one of the advantages of vast-tools ;-). But, unfortunately, no idea about LeafCutter...

CLeib commented 5 years ago

Sorry! wrong group