importing variants and no space left on device /tmp

vatlab / varianttools

software tool for the manipulation, annotation, selection, and analysis of variants in the context of next-gen sequencing analysis

https://vatlab.github.io/vat-docs/

GNU General Public License v3.0

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importing variants and no space left on device /tmp #113

Closed freedomq8 closed 5 years ago

freedomq8 commented 5 years ago

Hi there, I am importing a number of files some of them are large in size. I got no space error as result (assumption) "/tmp" folder filled the up free space. is there a way to direct the temporarily importing files to another path (with more space)?

I am using vtools 3.0.3 version and importing with --store sqlite option with -j140

BoPeng commented 5 years ago

I am on the road and cannot find the details but please check doc for vtools admin for an option to set temp directory.