how to convert vcf to tab-sep file?

vcflib / bio-vcf

Smart VCF parser DSL

MIT License

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Closed xiucz closed 3 years ago

xiucz commented 3 years ago

Hi,

After reading the README, I still could not find a way to convert vcf to tab-sep file? Including all information in INFO and FORMAT feild.

Thank you a lot. xiucz.

abalter commented 3 years ago

Use vcf2tsv from the vcflib library.

pjotrp commented 3 years ago

Use vcf2tsv from the vcflib library.

Yes. bio-vcf you can split the sub fields with a lambda - if you want a subset of data that can be useful.