vcflib / bio-vcf

Smart VCF parser DSL
MIT License
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No output for Statistics #53

Open wolfevolution opened 2 weeks ago

wolfevolution commented 2 weeks ago

Is your feature request related to a problem? Please describe. Hi! I'm considering using bio-vcf as a templating and filtering tool in my application. I noticed that the statistics function does not output any summary, also on the test dataset.

Additional context Version: bio-vcf 0.9.6 (biogem Ruby 3.2.3 with pcows) by Pjotr Prins 2015-2021

Output for a run on test/data/input/dbsnp.vcf

Waiting up to 180 seconds for pid=22678 to complete /tmp/bio-vcf_20241030-22677-nxt47f/000001-bio-vcf Processing remaining output... Trying: [[22678, 1, "/tmp/bio-vcf_20241030-22677-nxt47f/000001-bio-vcf"]] Set lock on [[22678, 1, "/tmp/bio-vcf_20241030-22677-nxt47f/000001-bio-vcf"]] Processing output file /tmp/bio-vcf_20241030-22677-nxt47f/000001-bio-vcf (blocking) Checking for output_lock on existing /tmp/bio-vcf_20241030-22677-nxt47f/000001-bio-vcf Trying to remove /tmp/bio-vcf_20241030-22677-nxt47f/000001-bio-vcf.keep Removing /tmp/bio-vcf_20241030-22677-nxt47f/000001-bio-vcf.keep Removing dir /tmp/bio-vcf_20241030-22677-nxt47f

==== Statistics ==================================

Total 0

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