add test data generation workflow

vdblab / vdblab-shotgun

Shotgun metagenomic sequencing processing pipeline

MIT License

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add test data generation workflow #85

Closed nickp60 closed 6 months ago

nickp60 commented 6 months ago

This gives us some simulated test data! Its not super flexible at the moment, but I have it generating a 1M read run based of f the genomes in the zymo mock, plus the human chr21 so we can test host depletion. generation instructions are in the README