vdblab / vdblab-shotgun

Shotgun metagenomic sequencing processing pipeline
MIT License
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Parallelize some of our bash scripts better #86

Open miraep8 opened 6 months ago

miraep8 commented 6 months ago

Recently ran across this great resource for effectively parallelizing bash scripts! It seems a lot of the tools we use already come equipped with some sort of optional "threads" flag - but for our own scripts or for tools that don't do so natively dropping this here as a potential resource our pipeline could benefit from.