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vdemichev / DiaNN

DIA-NN - a universal automated software suite for DIA proteomics data analysis.
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.dia format generated from Bruker .d folder #1119

Closed wenronchen closed 3 months ago

wenronchen commented 3 months ago

Hi Vadim,

I am trying to output all the information in the .dia format file. When reading a .dia format file generated from dia-PASEF data, is it possible to retrieve Frame information? If so, what specific details (attribute and data type) about the Frame are written in the .dia file?

Thank you for your time in advance.

Best,

Wenrong

vdemichev commented 3 months ago

Hi Wenrong,

The .dia format is not open and is only supposed to be read by DIA-NN itself. What would be the motivation in this case?

Best, Vadim

wenronchen commented 3 months ago

Hi Vadim,

I want to read and visualize the data in the Bruker .d file on my Mac. The .dia format appears to be a suitable option for this purpose, so I would like to ask about how you save the information from the raw file.

Thanks,

Wenrong

vdemichev commented 3 months ago

Hi Wenrong,

Maybe the best would be to use alphatims or timsrust.

Best, Vadim

wenronchen commented 3 months ago

Thank you, Vadim.