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vdemichev / DiaNN

DIA-NN - a universal automated software suite for DIA proteomics data analysis.
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the output file is empty #1233

Open oogene opened 3 weeks ago

oogene commented 3 weeks ago

Hi Vadim and Team, I used a fasta file generated in silico translation, then i first used the fasta to generate a spectral library, the log of this process is shown in the first picture. image Then i used the spectral library to analyze my DIA data, i used only one sample to check if this spectral library is reasonable. The log of searching process is shown in the second picture. image The problem arises in the outpt file, the output file is empty but only colnames, just like the following two pictures show. Can you tell me which step is incorrect and what could cause such a result? thank u! image 1730253941504

vdemichev commented 3 weeks ago

Hi,

Nothing passed strict FDR filters required for the matrices, i.e. please just use the main output report in .parquet format.

Best, Vadim