search

vdemichev / DiaNN

DIA-NN - a universal automated software suite for DIA proteomics data analysis.
Other
283 stars 53 forks source link

DIANN1.9 and 1.9.1 #1242

Open naiyoubuding opened 3 weeks ago

naiyoubuding commented 3 weeks ago

I recently searched the same plasma file with DIANN1.9 and DIANN1.9.1 and found that 1.9 identified 3800 proteins and 1.9.1 identified 7999 proteins. May I ask why this is，Attached are logs that run in both versions，I look forward to hearing from you, thank you very much

1.9 log.docx 1.9.1 log.docx

vdemichev commented 3 weeks ago

Hi,

Need to address the warning, i.e. generate an in silico-predicted library in a separate pipeline step and then use it to process the raw data, now without activating FASTA digest.

Best, Vadim