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vdemichev / DiaNN

DIA-NN - a universal automated software suite for DIA proteomics data analysis.
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Quantification module of QuantUMS #854

Open gukongxin opened 11 months ago

gukongxin commented 11 months ago

Hi Vadim,

In the protein quantification module of QuantUMS, which column in the report can be used for protein quantification?

What's difference between .parquet file andt .tsv file?

Is there a plan for when version 1.8.2 will be officially released?

Thank you in advance.

vdemichev commented 11 months ago

PG.MaxLFQ .parquet file is more compact and a lot quicker to load, recommend using it in the future, while .tsv will be maintained for compatibility with older downstream workflows. Yes, official release is coming, but no exact date yet.