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vdemichev / DiaNN

DIA-NN - a universal automated software suite for DIA proteomics data analysis.
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Pulling out information from Spectral Library created from fasta file #969

Open kwynne71 opened 6 months ago

kwynne71 commented 6 months ago

Hi, Can can I pull out m/z, retention time, charge, ion mobility and protein accession/name from a spectral phospho library created from the reviewed human uniprot database. Best Kieran

vdemichev commented 6 months ago

Hi Kieran,

Yes, for this you need to convert the library to .tsv using DIA-NN. But the output file could be very large. Alternatively, for identified peptides can just use the main report generated with --report-lib-info.

Best, Vadim

kwynne71 commented 5 months ago

Thank's Vadim

On Fri 22 Mar 2024, 18:31 Vadim Demichev, @.***> wrote:

Hi Kieran,

Yes, for this you need to convert the library to .tsv using DIA-NN. But the output file could be very large. Alternatively, for identified peptides can just use the main report generated with --report-lib-info.

Best, Vadim

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