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vdemichev / diann-rpackage

Report processing and protein quantification for MS-based proteomics
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Phophopeptide quantification #7

Open cutleraging opened 1 year ago

cutleraging commented 1 year ago

Hello,

Thanks for the great package. I have a phosphopeptide enrichment dataset. I am wondering how I can convert the diann_output.tsv to a table of phosphosites and their associated intensities.

Thanks, Ronnie

vdemichev commented 5 months ago

Hi Ronnie,

Sorry for the super late reply. Please try DIA-NN 1.9, it does output phosphosite table in a convenient ready-to-use format.

Best, Vadim