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vector-engineering / covidcg

A COVID-19 CoV Genetics (CG) browser to inform therapeutics development
https://covidcg.org
MIT License
26 stars 5 forks source link

Bowtie2 to Minimap2 #366

Closed atc3 closed 3 years ago

atc3 commented 3 years ago

Switch alignment tool to minimap2 – it's much faster and yields similar results (only differences I have seen are at the 3' and 5' UTRs – which is not as important)