Finalize data file formats.

veg / flea-pipeline

A pipeline for long-read sequencing data.

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Closed kemaleren closed 7 years ago

kemaleren commented 9 years ago

[x] The current nesting in files like sequences.json and trees.json assumes longitudinal sampling. Switch to a flat, general format.
[x] Replace frequencies.json with coordinates.json.
[x] Make a run overview json file.