veg / hivclustering

Infer molecular transmission networks from pairwise distance files (part of HIV-TRACE)
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Bug when no edges are filtered. #2

Closed spond closed 9 years ago

spond commented 9 years ago

There seems to be a bug in networkbuild.py

 print ("Edge filtering examined %d triangles, found %d poorly supported edges, and marked %d edges for removal" % (edge_stats['triangles'], edge_stats['unsupported edges'], edge_stats['removed edges']), file = sys.stderr)

When no edges are removed.

stevenweaver commented 9 years ago

fixed in commit 4add018dcfaa0360032b5f2f9f2f696f775dd4f7