Closed lskfs closed 4 years ago
Dear @moveAFs,
HyPhy needs to know where to find its library files (TemplateBatchFiles
). It will look in
/usr/local/lib/hyphy
)LIBPATH=/path/to/hyphy/res
, then look in this directoryBased on your example, you should be able to run
/share/app/software/hyphy-2.5.17/hyphy LIBPATH=/share/app/software/hyphy-2.5.17/res ...
Best, Sergei
/share/app/software/hyphy-2.5.17/hyphy LIBPATH=/share/app/software/hyphy-2.5.17/res ...
This solved problem, great thanks!
I tried to use pre-msa.bf tool to create codon alignment
when I run in hyphy folder it run successfully and generate the output:
but when I run in non-hyphy folder it got into LoadFunctionLibrary error:
with Error information as below:
So I create a softlink of libv3 under codon-msa directory:
then rerun the command show:
So how to run hyphy codon-msa tool under non-hyphy folder?