veg / hyphy-analyses

HyPhy standalone analyses
MIT License
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Installation error #29

Closed J-Calvelo closed 1 year ago

J-Calvelo commented 1 year ago

Hello, I'm having problems installing both hyphy-develop and hyphy-analyses and I'm not sure of the cause. Hyphy-develop seems to be installed and have compiled without issue but I can't run pre-msa.bf

This is the error:

Could not read command file from 'libv3/tasks/alignments.bf' (expanded to '/home/amanda/programas/hyphy-analyses/codon-msa/libv3/tasks/alignments.bf') in call to LoadFunctionLibrary("libv3/tasks/alignments.bf", /home/amanda/programas/hyphy-analyses/codon-msa/);

Function call stack 1 : LoadFunctionLibrary("libv3/tasks/alignments.bf", /home/amanda/programas/hyphy-analyses/codon-msa/);

    Keyword arguments:
            {
             "input":"example.fas"
            }

Check errors.log for execution error details.

Content of errors.log:

Error:Could not read command file from 'libv3/tasks/alignments.bf' (expanded to '/home/amanda/programas/hyphy-analyses/codon-msa/libv3/tasks/alignments.bf') in call to LoadFunctionLibrary("libv3/tasks/alignments.bf", /home/amanda/programas/hyphy-analyses/codon-msa/); Could not read command file from 'libv3/tasks/alignments.bf' (expanded to '/home/amanda/programas/hyphy-analyses/codon-msa/libv3/tasks/alignments.bf') in call to LoadFunctionLibrary("libv3/tasks/alignments.bf", /home/amanda/programas/hyphy-analyses/codon-msa/);

I already checked and there is no folder named libv3 in "/home/amanda/programas/hyphy-analyses/codon-msa/"

thanks

stevenweaver commented 1 year ago

Dear @J-Calvelo,

Please see https://github.com/veg/hyphy-analyses/issues/11#issuecomment-677662366.

Best, Steven

J-Calvelo commented 1 year ago

I see. Thanks!