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veg / hyphy

HyPhy: Hypothesis testing using Phylogenies
http://www.hyphy.org
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Issues with files #1482

Closed cms2775 closed 2 years ago

cms2775 commented 2 years ago

Hi, Apologies if this post is unclear or is missing information, I am new to this sort of thing and not really good with computers. I am having issues getting Datamonkey to work with uploaded files. Uploading an alignment file with the universal genetic code selected and synonymous rate variation (yes) and clicking run analysis results in an error message reading "Cannot read property 'on' of undefined". At first I assumed it was an issue with my alignments, but then I tried the .nex tutorial files from http://data.hyphy.org/web//contrast-FEL/empirical/ and got the same error message. The issue happens with all the analysis methods I've tried (FEL, BUSTED, etc). Am I doing something wrong? I watched the tutorial video and followed the same steps exactly with the tutorial file and it didn't work.

Thanks!

cms2775 commented 2 years ago

If it helps, attempting to run the analysis using the SLAC plugin on MEGA11 returns the following error: Cannot GET /slacrty%20'on'%20of%20undefined

stevenweaver commented 2 years ago

Dear @cms2775,

Thank you reporting this issue. Routine maintenance was being performed on datamonkey, and it entered a rare state of not being able to handle data uploads.

The issue should now be resolved. Can you please try again?

Best, Steven

cms2775 commented 2 years ago

Thanks! It's running with no issues now.