Hello, I have several single-gene trees, each of which has about 13 species. First, I want to know if there is any species subject to positive selection in each tree; second, if there is any species subject to positive selection, what are the selection sites and what model should I choose suitable? My own method is to choose the FUBAR model, no foreground. However, when I import the calculation result to the official website for visualization, the official website does not indicate me who the software has chosen as the foreground. So there are two main questions: ① Based on my purpose, how to choose the model? ② How do I know the foreground of the software
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1 year ago
Hello, I have several single-gene trees, each of which has about 13 species. First, I want to know if there is any species subject to positive selection in each tree; second, if there is any species subject to positive selection, what are the selection sites and what model should I choose suitable? My own method is to choose the FUBAR model, no foreground. However, when I import the calculation result to the official website for visualization, the official website does not indicate me who the software has chosen as the foreground. So there are two main questions: ① Based on my purpose, how to choose the model? ② How do I know the foreground of the software